CDS

Accession Number TCMCG002C33015
gbkey CDS
Protein Id XP_020079754.1
Location complement(join(2506713..2506811,2507002..2507079,2507489..2507653,2507929..2507973,2508139..2508270,2509030..2509128,2509741..2509836,2510613..2510797,2511273..2511525,2511729..2511836,2511910..2511967,2512243..2512394,2512486..2512580,2513978..2514104,2514731..2514899,2516144..2516292))
Gene LOC109703527
GeneID 109703527
Organism Ananas comosus

Protein

Length 669aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020224165.1
Definition cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category A
Description Cleavage and polyadenylation specificity factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14402        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGACTTCGGTCCAGGTGACTCCCCTGTGCGGCGTATACGGCGAGAACCCGCTGTGCTACCTCTTGTCCATCGATGGCTTCAACTTCCTCATGGATTGTGGGTGGAACGACCTCTTCGACCTCAACCTCCTCCAACCCCTCTCTAGGGTAGCATCAAAAGTTGATGCCGTTTTGCTATCACATCCTGACATTCTTCACCTAGGCGCCTTGCCGTATGCTATGAAACATCTCGGACTCTCTGCTCCTGTTTATTCGACAGAACCTGTCTATAGACTTGGTCTTTTGACCATGTATGATCACTACCTTTCTCGAAGAATAAAGGAGAAGGGATTGTTATTGCTCCTCATGTGGCTGGCCATCTTCTGGGAGGTACTGTTTGGAAGATTACAAAGGATGGAGAGGATGTCATATATGCAGTTGACTTCAACCATCGAAAAGAACGAGGCAATACTGAAAGCACTGAGGGCTGATGGCACTGTTTTGCTCCCTGTTGATACAGCTGGGAGAGCATTGGAACTTATTTTGATACTGGAGCAGTATTGGGATCAGCAGCATTTAAGTTTCCCAATCTTCTTTCTGACAAACGTAGCTACAAGCACAATTGATTATGTCAAGAGTTTCCTTGAGTGGATGAGTGATTCGATAGCAAAATCCTTTGGACATACACGAGACAACGCCTTCTTATTGAAACATGTAACACTCATAATCAATAGGAATGAGCTAGACAACTTTACTGATGTTCCAAAGGTAGTTTTAGCATCTATGGCTAGTTTGGAGGTTGGCTTCTCTCATGACATTTTTGTTGAATTGGCAACAGATGCAAAGAATCTTGTGCTTTTTACAGAGAAGGGCCAGTTTGGGACGCTAGCACGCATGCTTCAAGTGGACCCACCGCCCAAAGCTGTAAAGGTTATTATGAGTAAAAGAATTCCTTTAGTTGGTGATGAATTGAAAGCCTATGAAGAAGAACAAGAACGCATTAAAAAAGAAGCCACCCTTAAGGCTAGCCTTGTTAAAGAGGAGGAATCAAGGGTTTCTCATGGATCAGATGCTAATGTTGCTGATCCAATGGTGATCGATGTCAGCTCTTCTCATGTTTCATCCAACATAGCCAGCTCACATCTTGGTGGCCATATGGACATTGTGATTGATGGATTTGTTCCACCATCCACCAGTGTTGCTCCAATGTTTCCCTTCTTTGAAAACACAGCTGAATGGGATGACTATGGTGAAGTCATCAATCCTGATGATTACATTAGGAAGGAAGAAGATATGGATCAGTTCTCCATGCTTGCCACTGGAGATGGTTTAGATGGTAAGCTTGACGAAGGTTCCGCGCACTTGCTCCTTGATTCAACACCCTCTAAAGTTGTTTCGAGTGAAACGACCGTGCAAGTGAAGTGTGCATTGACTTACATGGATTTTGAAGGTCGGTCTGATGGGCGTTCTGTAAAATCTATTCTAGCTCACGTGGCTCCATTGAAACTTGTTCTAGTGCATGGGTCAGCAGAGGCGACTGAGCACCTGAAAATGCACTGTGTGAAACATGTCTGCCCTCATGTTTATGCACCACAGATTGAAGAAACTATTGATGTGACCTCTGATTTGTGTGCTTACAAGGTGCAGCTTTCAGAGAAGTTAATGAGTAATGTTCTCTTTAAGAAGTTAGGCGAGCATGAGATCTCATGGGTGGATGCAGAAGTAGGAAAGACAGATGACATGCTTACCCTTCTCCCTCTTTCATCAAACCCACCAGCCCACAAATCTGTTCTTGTGGGAGATCTGAAGCTGGCAGATTTCAAGCAGTTCCTTGCAGGCAAAGGTGTCCAGGTGGAATTTGCGGGGGGAGGTGCCTTACGGTGTGGCGAGTACGTAACGCTGCGGAAGATAAGTGATTCCAGCCAGAAGGGTGTTACCGGTGCTCAGCAAATAGCTATAGAAGGCCCCTTGTGTGAAGAATATTACAAGATTCGGGACCTTCTCTATTCACAATTTTACTCGCTATAA
Protein:  
MGTSVQVTPLCGVYGENPLCYLLSIDGFNFLMDCGWNDLFDLNLLQPLSRVASKVDAVLLSHPDILHLGALPYAMKHLGLSAPVYSTEPVYRLGLLTMYDHYLSRRIKEKGLLLLLMWLAIFWEVLFGRLQRMERMSYMQLTSTIEKNEAILKALRADGTVLLPVDTAGRALELILILEQYWDQQHLSFPIFFLTNVATSTIDYVKSFLEWMSDSIAKSFGHTRDNAFLLKHVTLIINRNELDNFTDVPKVVLASMASLEVGFSHDIFVELATDAKNLVLFTEKGQFGTLARMLQVDPPPKAVKVIMSKRIPLVGDELKAYEEEQERIKKEATLKASLVKEEESRVSHGSDANVADPMVIDVSSSHVSSNIASSHLGGHMDIVIDGFVPPSTSVAPMFPFFENTAEWDDYGEVINPDDYIRKEEDMDQFSMLATGDGLDGKLDEGSAHLLLDSTPSKVVSSETTVQVKCALTYMDFEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKMHCVKHVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGEHEISWVDAEVGKTDDMLTLLPLSSNPPAHKSVLVGDLKLADFKQFLAGKGVQVEFAGGGALRCGEYVTLRKISDSSQKGVTGAQQIAIEGPLCEEYYKIRDLLYSQFYSL